Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891273.1_cds_XP_016446036.1_40934
CDS Infomation

[gene=LOC107771206] [db_xref=GeneID:107771206] [protein=putative late blight resistance protein homolog R1A-10] [protein_id=XP_016446036.1] [location=complement(join(3881..3894,4727..7361))] [gbkey=CDS]
Sequence

ATGGCTGCTCATGCTGCTGTTACTTCTCTGATGGGAATAATGCAGCAGCTTCCACAATCC
CGCTTAGACATTCAGCAGGGTCATAAATTACTTTTGGAATTACTCCACAAGAAGGTTGGC
TCTCTGCTAGAGTTTCTGGACAATTCTGATGATGAACCAATGAAGGATTTGCAGAAAAAG
GTCAAAGATCTAGCAAATAAAGTAGAGGAAAAAGTCGAATCACACATTCAAAGAGAGTCT
CAGAAGACGCTTCTTAAGATGTTGCAGCGAGTCTTCCACCTTCCATCAAAGTCCCATGAG
AGACTTTATAAGATCTTGCTACAAGCTATATGTGCTGTTGATTCGATCAAGGAAAAGCTC
ATCAAACAGATGAAGAATAACAACTTGCAAGCTGTAAATCATTCAATCAGTGGTTCTAGT
TCACCACGATTGCATGTTTCAACCCTCGTGAACGATATGGTTGGGTACAACATTGAACAA
GAGCGCATGCGGAGTCAACTTACCAGACACGCATCTCAACTGGAAGTCATTTCTATTGTT
GGGATGGGCGGCATAGGTAAGTCAACTTTTGCCAGTAAGATGTTTTCTGATCCCTCAATT
TTGAGCTTCTTTGATGTTCGTGGATGGATTACTGTGTCCAAGAACTACAGTTTAAGAAAG
ATGCTTCTAACCCTCCTTCAAGACACTGTTGGGGTGGCCAAAGAGCTTGATGAGAAAAGC
GATGGAGAGCTAGCAGATCGCTTGCAAAAAAGTTTAAAGGGTAGAAGGTATTTGATTGTT
GTGGATGATATATGGAGTAGGGAAGCCTGGGATGATGTTAGATTATGTTTTCCAGAAAAC
AATAATAGAAGTCGGATATTGTTGACTACTCGAGACATGAAGGTTGCTCAATATGCTAGC
TCTCCTAAGGATCTGTTTCCAATGCGTTTCCTAGAGCCAAAGGAAAGTTGGCATTTGTTT
TGCCAAAAGGTGTTTGGCAAAAACGATTGTCCAACTGAATTTGAGAATGTCGCGAAGGAA
GTTGTAAGTAATTGCAAAGGATTACCACTAATGATTTCTGTGGTTGCAGGGACTCTCTCT
AGCAAGAAAACAATGGATGAGTGGATCAAAGTAGCTCAAAGTGTGATCTCATCAGTAGAT
CTTGATGATTATCAGTATTGCTCAAGAGTGCTTCGTTTGAGCTACAATCATCTTCCTTCT
TATTTGAAAGCTTGCTTTCTTTATTTTGGAGTTTTTCCAAAAGCTAGTGAGATTTCTGTG
AAGAAATTGACTAGATTATGGATTGCCGAAGGTCTCTTAGAGCTAAAGGGGTCTGAAGGA
TTGGAACAAGTAGCTACTAATATTTTACATGATCTTATTGATAAAAGTCTGGTTGTTGTT
AGCAAGAAAAATTTGGATGACAAGATCAAGACATGTAGGATTCATGATCTTCTCCATGAT
TTATGCTTGAGAGAAGGTGAAAGCGAGAATCTTTTGTATGTTGCATACCTAGGATCTAGA
AGGGTTTCCTCTCAAGGCCGATGGGTGTCAGTTAATCCAGAGCGAGGTTATGATTCTTAT
GCGCTTTTGGAAAATCTTACTCATAGCAAAATACGTTCTATTCATTTTCATCCCACTGAT
CTGGTGCGACATCAATTATCTATTAAACTATTCCATTTTAAACTTCTTAGAGTACTGGAC
TTGGTGACAATAAGATTAGTTTCATTCCCTATTGGAGTAGTACACCTAGCTTCTTTGAGA
TATTTGGCTGTGGTGGTTAATTTTGAGACTTCTGAACATCAATCAATTTCCAATCTTTGG
AATTTACAAACTTTTATTTTTTCCATAAGTCTTCCACAAATCGATCTTGTGCATTTACCA
AATGGAATTTGGGAAATGTCTCAATTGAGGCATCTTCACTCTACAAGGATGTCTCTATAT
TCTCCTCCAAAGGTATCAGCTAATGAAGTTAAGTACCGCGTTTTGGAAAACTTACAAAGT
GTTTCTGGGTTGAGTCCTTGTTGTTGCACAAAAGAAATATTTGAAGGGATTAAAAATGTG
AGAAAATTGGGTATTTCTGGCACTGAAGACGAATTTGATTATGAGCCTATATGCTTAGAT
AATCTAATATATTTACACGAGCTTGAGGAACTAAAAATCGCATCATACATCCTTACCAGA
TATGATGTACTTCTTAGTCTTCCATTCGCAAGTTCTTTCCCACCTAATCTCAAGAAGCTG
ACACTCCGCAAAACTTTTCTACTGTGGAAGGACATGACGATCATTAGCAAGTTGCCCAAA
CTTGAGGTGCTCCAGTTGAAGGCTGATGCCTTTGTAATTAGTTATCCCGTAGATACAGTC
TGGGAAGTAACAGAGATGGGATTTCTTGAATTGAAGTTCTTGCTCCTTGAGTGGTTGGAT
CTTGATTACTGGAGAGCCGCTGATGATTATTTCCCATGCCTTGAGCACATAGTTATCAGA
AACTGTCGTACGTTAAAAGAGATTCCTGAAGGATTTGCAGATAGTTTGACACTGCAGCAA
ATTCAGTTACATCGATGTACTTCTTCCCTTGTGACTTTTGCTGAGCAAATCCAAGAAAAT
CACGAGAGTTTGGGGAACAACATGCTTAAAGTTTATTCCTTCGACACAATTCGAGGGAGA
GCTTCTTAG

Peptide Sequence

PEP ID

XP_016446036.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1A-10 [Nicotiana tabacum]
Sequence

MAAHAAVTSLMGIMQQLPQSRLDIQQGHKLLLELLHKKVGSLLEFLDNSDDEPMKDLQKK
VKDLANKVEEKVESHIQRESQKTLLKMLQRVFHLPSKSHERLYKILLQAICAVDSIKEKL
IKQMKNNNLQAVNHSISGSSSPRLHVSTLVNDMVGYNIEQERMRSQLTRHASQLEVISIV
GMGGIGKSTFASKMFSDPSILSFFDVRGWITVSKNYSLRKMLLTLLQDTVGVAKELDEKS
DGELADRLQKSLKGRRYLIVVDDIWSREAWDDVRLCFPENNNRSRILLTTRDMKVAQYAS
SPKDLFPMRFLEPKESWHLFCQKVFGKNDCPTEFENVAKEVVSNCKGLPLMISVVAGTLS
SKKTMDEWIKVAQSVISSVDLDDYQYCSRVLRLSYNHLPSYLKACFLYFGVFPKASEISV
KKLTRLWIAEGLLELKGSEGLEQVATNILHDLIDKSLVVVSKKNLDDKIKTCRIHDLLHD
LCLREGESENLLYVAYLGSRRVSSQGRWVSVNPERGYDSYALLENLTHSKIRSIHFHPTD
LVRHQLSIKLFHFKLLRVLDLVTIRLVSFPIGVVHLASLRYLAVVVNFETSEHQSISNLW
NLQTFIFSISLPQIDLVHLPNGIWEMSQLRHLHSTRMSLYSPPKVSANEVKYRVLENLQS
VSGLSPCCCTKEIFEGIKNVRKLGISGTEDEFDYEPICLDNLIYLHELEELKIASYILTR
YDVLLSLPFASSFPPNLKKLTLRKTFLLWKDMTIISKLPKLEVLQLKADAFVISYPVDTV
WEVTEMGFLELKFLLLEWLDLDYWRAADDYFPCLEHIVIRNCRTLKEIPEGFADSLTLQQ
IQLHRCTSSLVTFAEQIQENHESLGNNMLKVYSFDTIRGRAS

Transcript Sequence

Gene sequence data has not been registered.